AtPAN(
A
rabidopsis
t
haliana
P
romoter
A
nalysis
N
et)
is a database for
transcription regulatory networks (TRN) construction
in Arabidopsis . AtPAN can detect
TFBSs and their corresponding transcription factors (TFs)
in a promoter or a set of promoters in Arabidopsis. Additionally, the
co-expressed TFs and their target genes
from microarray expression data could be retrieved from AtPAN. Furthermore, proteins which interact with the co-expressed TFs can then be found, and
co-expressed TRN
are reconstructed. On the other hand,
the relationships between TFs and their target genes obtained from experiments that reported in literatures
are also considered in TRN reconstruction in AtPAN.
(AtPAN will be updated according to the increasing number of plant TFs/TFBSs.)
(AtPAN will be updated according to the increasing number of plant TFs/TFBSs.)
 |  | Start to analyze |
 | | Start to analyze |
 | | Start to analyze |
 | | Start to analyze |
Insititute of Tropical Plant Sciences National Cheng Kung University, Tainan, Taiwan
Contact with: Wen-Chi Chang