"Gene Group Analysis" allows you to identify the co-occurence of the TFBS and the combinatorial transcription factors that co-regulate a group of genes.


3 steps are required as follows:

Please input a group of gene ID and seperate with ";"

Set the parameter

Choose the promoter region for analysis

From -bp to +bp of the TSS

How many co-occurence TFBSs you want to analyze?

Choose TFBS for Analysis

Choose the threshold for co-occurence analysis

Support >=%  (the frequency of promoters containing the combinatorial TFBS A<-->B)
Confidence >=  (the conditional frequency of promoters containing TFBS A also containing B)
Department of Life Science and Technology,
Insititute of Tropical Plant Sciences Nation Cheng Kung University, Tainan, Taiwan
Contact with: Wen-Chi Chang